Automatic vertebrae, disc, cord & canal segmentation with morphometric analysis — run it on your spine MRI or CT studies right in the PACS viewer.
Research tool — not a regulated medical device. Their results are not a diagnosis and can be wrong. Every result must be reviewed by a qualified clinician, who remains responsible for the clinical decision.
Source: TotalSpineSeg
TotalSpineSeg (nnU-Net) labels every vertebra, intervertebral disc, the spinal cord and the canal on any spine MRI or CT, then computes morphometry — vertebra & disc volumes and heights, cord/canal cross-sectional area and curvature/Cobb angles — with an interactive 3-plane and 3D viewer.
A pre-computed example: labelled vertebrae, discs, cord and canal in an interactive 3-plane + 3D viewer — this is what you get. Run it on your own study from the PACS viewer.
Real morphometrics computed from this example — [A] exact · [B] solid method · [C] coarse estimate. NOT for clinical decisions.
| Level | Vol mL | SI mm | AP mm | LR mm |
|---|---|---|---|---|
| C7 | 4.43 | 14.0 | 31.4 | 31.4 |
| T1 | 15.33 | 30.8 | 66.8 | 60.0 |
| T2 | 16.75 | 33.6 | 64.1 | 64.1 |
| T3 | 16.06 | 33.6 | 58.6 | 62.7 |
| T4 | 16.57 | 39.2 | 58.6 | 60.0 |
| T5 | 16.65 | 36.4 | 57.3 | 58.6 |
| T6 | 18.59 | 40.6 | 57.3 | 54.5 |
| T7 | 18.76 | 39.2 | 55.9 | 54.5 |
| T8 | 18.60 | 26.6 | 57.3 | 54.5 |
| T9 | 22.61 | 42.0 | 62.7 | 53.2 |
| T10 | 26.90 | 53.2 | 68.2 | 53.2 |
| T11 | 29.07 | 53.2 | 69.5 | 49.1 |
| T12 | 31.75 | 50.4 | 73.6 | 42.3 |
| L1 | 32.61 | 40.6 | 79.1 | 55.9 |
| sacrum | 1.97 | 2.8 | 57.3 | 40.9 |
This project is free. If you would like to help with hosting and development, you can donate in stablecoins — open the Donate page.
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